BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A07SP1|AL426773
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1741 0.0
>3x_Contig1743
Length = 20172
Score = 1741 bits (869), Expect = 0.0
Identities = 932/959 (97%), Gaps = 3/959 (0%)
Strand = Plus / Minus
Query: 1 ataaaactggaatacaatgagttactagtgccgtagtacaaggtgtaactataatgtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8368 ataaaactggaatacaatgagttactagtgccgtagtacaaggtgtaactataatgtcag 8309
Query: 61 gtagaagcgcaaccctagtcttcatctaaagatcagtagatatttattgagctgaccatg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8308 gaagaagcgcaaccctagtcttcatctaaagatcagtagatatttattgagctgaccatg 8249
Query: 121 cagtatttgawtatgtttaacggacaattacagatgtyatgtgcggttaaagtctgccac 180
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 8248 cagtatttgaatatgtttaacggacaattacagatgtcatgtgcggttaaagtctgccac 8189
Query: 181 aagtwggaattgaccaacatcgttctgcgcggagatacagtcatcctcatattggtgatg 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8188 aagtaggaattgaccaacatcgttctgcgcggagatacagtcatcctcatattggtgatg 8129
Query: 241 aaagcttactgatctgcgttctacaaggaataactagtggtatattcattttcttcattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8128 aaagcttactgatctgcgttctacaaggaataactagtggtatattcattttcttcattc 8069
Query: 301 acgtgactggwcttatgggatgtcccagtgtgcagaagtagaggttggaaagatacatac 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8068 acgtgactggacttatgggatgtcccagtgtgcagaagtagaggttggaaagatacatac 8009
Query: 361 atttcggttaacggctaatcatgaggggtttgtwaaggtatatggcagatgtacatagtt 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8008 atttcggttaacggctaatcatgaggggtttgtaaaggtatatggcagatgtacatagtt 7949
Query: 421 aaatacaagccatatcgcttcaattacattctgtcgacatcgacggttttcaggtaaaah 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7948 aaatacaagccatatcgcttcaattacattctgtcgacatcgacggttttcaggtaaaaa 7889
Query: 481 atcggaccatcttagcgtctaawtagtttatgcgcctttttgagagtttcttttacatcg 540
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 7888 atcggaccatcttagcgtctaaatagtttatgcgcctttttgagagtatcttttacatcg 7829
Query: 541 accaaaacatggcagtttcagataattaggtgtcataaatgattactgttcacgtgactt 600
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7828 accaaaacatggcagtttcagataattaggtgtcataaatgattactgtacacgtgactt 7769
Query: 601 gtatcacgtgtgcgt-agttttttttttctgttttccttcgcgcttcgttggaggagaag 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7768 gtatcacgtgtgcgtgagttttttttttctgttttccttcgcgcttcgttggaggagaag 7709
Query: 660 gtcggggccggcctaacaccattacctaggaccggaccaagggcgtagacggcatcttcg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7708 gtcggggccggcctaacaccattacctaggaccggaccaagggcgtagacggcatcttcg 7649
Query: 720 gaccgagtbggaggacgtgaccacaaggagttcagtgcaaagggaatyattgaaaggtga 779
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7648 gaccgagtcggaggacgtgaccacaaggagttcagtgcaaagggaatcattgaaaggtga 7589
Query: 780 ttaccgctgactggcgccgaat-gssaaaaaatcgtatattatgcggtattccagagccc 838
|||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||
Sbjct: 7588 ttaccgctgactggcgccgaatggcgcaaaaatcgtatataatgcggtattccagagccc 7529
Query: 839 actctgattyctcgaacaagttagatccmaatttttaagg-tttcgtatgtgccttawtg 897
||||||||| ||||||||||| |||||| ||||||||||| |||||||||||| | | ||
Sbjct: 7528 actctgattcctcgaacaagtcagatccaaatttttaaggttttcgtatgtgcttcattg 7469
Query: 898 tttctacaatgctattctactttttgaaagcmtttcacaacgtcgcttctcttacttgg 956
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 7468 tttctacaatgctattctactttttgaaagcatttcacaacgtcgcttctctaacttgg 7410
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5881
Number of Sequences: 1807
Number of extensions: 5881
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)